The detailed information of tRNA gene sequence


Sequence ID>w000622
Genome IDAAVU01000027
Search identical group
Phylum/ClassCyanobacteriota
SpeciesLyngbya sp. PCC 8106 [AAVU]
Start position on genome 37247
End posion on genome 37165
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctcccttttc
tRNA gene sequence 
GGAAGATACTGCTGAAGGGACAGCAACCCGTCTTGAAAACGGGAGCAAGTTAACACTTGG
GGGTTCGATTCCTCTATCTTCCTtga
Downstream region at tRNA end position 
tttttttgtg
Secondary structure (Cloverleaf model)
>w000622	Ser	TGA
                   c      Ttga tttttttgtg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T T
                    A     T C T C C     A
      A A G        C      + | + | |     G
    G       T C G T       G G G G G     C
    G       | | | |                 T T
    G       A G C A
      A C          A     AGCAAGTTAACACTT
                    C - G
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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