The detailed information of tRNA gene sequence


Sequence ID>WENV180506300
Genome IDOCAS01000199
Search identical group
Phylum/Class[OCAS] human gut metagenome; faeces
Species
Start position on genome 44966
End posion on genome 44869
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatatgatat
tRNA gene sequence 
GGGGGTAGTTGGGTGACTGGTGTGCCTCCTGGTCTTCAAAACCAGTGTGGGGCGTTAAGA
GCGTCCCGGGTGGGTTCGATTCCCACATGCCTCCGCCA
Downstream region at tRNA end position 
aaaaagtgtt
Secondary structure (Cloverleaf model)
>WENV180506300	SeC	TCA
                   t      GCCA aaaaagtgtt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T + G
                     A - T
                     G   A          T T
                    T     C A C C C     A
      C A G        T      | | | | |     G
    T       T G G G       G T G G G     C
    G       + | | +                 T T
    G       G C C T
      T G T        C     TGTGGGGCGTTAAGAGCGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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