The detailed information of tRNA gene sequence


Sequence ID>w000232
Genome IDABCE01000016
Search identical group
Phylum/ClassPlanctomycetota
SpeciesGimesia maris DSM 8797 [ABCE]
Start position on genome 123488
End posion on genome 123400
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaagagatca
tRNA gene sequence 
GGAAGTCATCCGGCTGGATGAGGGCTCTGTCTTGAAAACAGAGGGCGCTGAAAAAGTGCT
TGTGGGTTCGAGTCCCACGGCTTCCGCTG
Downstream region at tRNA end position 
gagaaaagtg
Secondary structure (Cloverleaf model)
>w000232	Ser	TGA
                   a      GCTG gagaaaagtg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     C - G          T G
                    A     C A C C C     A
        T C        T      | | | | |     G
      G     G G C C       G T G G G     C
      G         | |                 T T
      A     A G G G
        T G        C     GGGCGCTGAAAAAGTGCTT
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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