The detailed information of tRNA gene sequence


Sequence ID>W141055885
Genome IDAOTM01000021
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pedis str. T M1 [AOTM]
Start position on genome 24693
End posion on genome 24765
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gccggtttat
tRNA gene sequence 
GTCTCCTTCGTCTAGTGGTTAGGACATCGGGTTTTCATCCCGACAACAGGGGTTCAATTC
CCCTAGGAGATGCtt
Downstream region at tRNA end position 
tgaaaagctc
Secondary structure (Cloverleaf model)
>W141055885	Glu	TTC
                   t      GCtt tgaaaagctc
                     G + T
                     T - A
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      T G A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAAC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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