The detailed information of tRNA gene sequence


Sequence ID>W141055900
Genome IDAOTM01000056
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pedis str. T M1 [AOTM]
Start position on genome 2403
End posion on genome 2475
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aaaggtgtaa
tRNA gene sequence 
GGTCCCTTCGTCTATCGGTTTAGGACATGAGATTCTCAATCTTAAAAGACGGGTTCGATT
CCCGTAGGGACCGtta
Downstream region at tRNA end position 
aaaaaagttt
Secondary structure (Cloverleaf model)
>W141055900	Glu	CTC
                   a      Gtta aaaaaagttt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T T A        A     AAAG
                    T - A
                    G + T
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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