The detailed information of tRNA gene sequence


Sequence ID>W141055917
Genome IDAOTM01000159
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pedis str. T M1 [AOTM]
Start position on genome 4283
End posion on genome 4212
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gttgaatatt
tRNA gene sequence 
GGCGCCGTACCCAAGCGGTAAGGGAGAGGTCTGCAAAACCTTTATGCATCAGTTCGATTC
TGATCGGCGCCTttt
Downstream region at tRNA end position 
tccaatttta
Secondary structure (Cloverleaf model)
>W141055917	Cys	GCA
                   t      Tttt tccaatttta
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T A G T C     A
        G A        A      | | | | |     G
      C     A C C C       A T C A G     C
      G       | | |                 T T
      G     A G G G
        T A        A     TATGC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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