The detailed information of tRNA gene sequence


Sequence ID>W141055931
Genome IDAOTN01000076
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pedis str. B 683 [AOTN]
Start position on genome 6401
End posion on genome 6474
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atctctttca
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGCGGGTCGCCGGTTCAAG
TCCAGCTGGGCCCAttt
Downstream region at tRNA end position 
tttataaaca
Secondary structure (Cloverleaf model)
>W141055931	Met	CAT
                   a      Attt tttataaaca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     C G A C C     A
      T G A        A      | |   | |     A
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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