The detailed information of tRNA gene sequence


Sequence ID>W141056000
Genome IDAOTO01000671
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pedis isoM1111 [AOTO]
Start position on genome 1707
End posion on genome 1789
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tcactgttaa
tRNA gene sequence 
GCGAGAGTGGTGGAATTGGCAGACACGCTAGACTTAGGATCTAGTGCTTCGGCGTGAGGG
TTCAAGTCCCTCCTCTCGCACAA
Downstream region at tRNA end position 
ttccacaaag
Secondary structure (Cloverleaf model)
>W141056000	Leu	TAG
                   a      ACAA ttccacaaag
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G T G       G A G G G     C
    G         | | |                 T T
    G       A C A C
      C A G        G     TGCTTCGGCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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