The detailed information of tRNA gene sequence


Sequence ID>W141056004
Genome IDAOTO01000849
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pedis isoM1111 [AOTO]
Start position on genome 2022
End posion on genome 1949
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ataaaacacg
tRNA gene sequence 
GTGGGTGTAGTTCAGTTGGTAGAGCGCCAGATTGTGGTTCTGGTTGTCGTGGGTTCAAGT
CCCATCACCCACCCtt
Downstream region at tRNA end position 
aaaattcgat
Secondary structure (Cloverleaf model)
>W141056004	His	GTG
                   g      CCtt aaaattcgat
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T A C C C     A
      T G A        A      + | | | |     A
    T       C T T G       G T G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          G     TTGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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