The detailed information of tRNA gene sequence


Sequence ID>W141056054
Genome IDAOTQ01000025
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pedis isoM1220 [AOTQ]
Start position on genome 53674
End posion on genome 53746
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cggggttttt
tRNA gene sequence 
GCTCCTGTAGCTCAGTCGGCAGAGCACAACCATGGTAAGGTTGGGGTCAGCAGTTCAATT
CTGCTCGGGAGCTttt
Downstream region at tRNA end position 
ccggaatagg
Secondary structure (Cloverleaf model)
>W141056054	Thr	GGT
                   t      Tttt ccggaatagg
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     T C G T C     A
      T G A        A      | | | | |     A
    C       C T C G       A G C A G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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