The detailed information of tRNA gene sequence


Sequence ID>W141056072
Genome IDAOTQ01000121
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pedis isoM1220 [AOTQ]
Start position on genome 6254
End posion on genome 6178
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttacctacaT
tRNA gene sequence 
CGCAGGGTAGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGGAGGTTCGAGT
CCTCTCCCTGCTAACC
Downstream region at tRNA end position 
tttttaagac
Secondary structure (Cloverleaf model)
>W141056072	Met	CAT
                   T      AACC tttttaagac
                     C   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T G A        A      + | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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