The detailed information of tRNA gene sequence


Sequence ID>W141056080
Genome IDAOTQ01000176
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pedis isoM1220 [AOTQ]
Start position on genome 1523
End posion on genome 1449
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cgtcctaaaa
tRNA gene sequence 
CGGGCAGTAGCGCAGGGGTAGCGCGCTTGGTTCGGGACCAAGAAGTCGGGGGTTCAAATC
CCCCCTGCCCGACTA
Downstream region at tRNA end position 
tttaattata
Secondary structure (Cloverleaf model)
>W141056080	Pro	CGG
                   a      ACTA tttaattata
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C C C C C     A
        G A        A      | | | | |     A
      G     C G C G       G G G G G     C
      G     | | | |                 T T
      G     G C G C
        T A        G     AAGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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