The detailed information of tRNA gene sequence


Sequence ID>W141056086
Genome IDAOTQ01000202
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pedis isoM1220 [AOTQ]
Start position on genome 3488
End posion on genome 3563
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ctttgctttT
tRNA gene sequence 
GCGCCTGTAGCTCAGCTGGATAGAGCATCGGACTTCGAATCCGCAGGTCGCACGTTCGAA
TCGTGTCGGGCGCAAgt
Downstream region at tRNA end position 
ttaatgtctt
Secondary structure (Cloverleaf model)
>W141056086	Arg	TCG
                   T      AAgt ttaatgtctt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     T G T G C     A
      C G A        A      + | | | |     G
    T       C T C G       G C A C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    T   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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