The detailed information of tRNA gene sequence


Sequence ID>W141056088
Genome IDAOTQ01000258
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pedis isoM1220 [AOTQ]
Start position on genome 3029
End posion on genome 3102
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tcactttatc
tRNA gene sequence 
GGGCGCTTAGCTCAGCTGGTACGAGCGTCTGGTTTACACCCAGAATGTCGGCGGTTCGAT
CCCGTCAGCGCCCAtct
Downstream region at tRNA end position 
ttaaatcctt
Secondary structure (Cloverleaf model)
>W141056088	Val	TAC
                   c      Atct ttaaatcctt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          C T
                    T     C T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A C        G     ATGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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