The detailed information of tRNA gene sequence


Sequence ID>W141056105
Genome IDAOTR01000023
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pedis isoM1224 [AOTR]
Start position on genome 6474
End posion on genome 6545
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
aactgttatt
tRNA gene sequence 
GCGGATGTCGTATAACGGCTATTACCCCAGCTTCCCAAGCTGGAGACGGGGGTTCGACTC
CCCTCATCCGCTtat
Downstream region at tRNA end position 
tcttcaataa
Secondary structure (Cloverleaf model)
>W141056105	Gly	CCC
                   t      Ttat tcttcaataa
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T C
                    T     T C C C C     A
      C A A        C      + | | | |     G
    G       T A T G       G G G G G     C
    G         | | |                 T T
    C       T T A C
      T A          C     AGAC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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