The detailed information of tRNA gene sequence


Sequence ID>W141056107
Genome IDAOTR01000056
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pedis isoM1224 [AOTR]
Start position on genome 8342
End posion on genome 8259
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tatcaaaatc
tRNA gene sequence 
GCTGAAGTGGTGGAATAGGTAGACACTAGGGACTTAAAATCCCTTGGCAGTAATGCCGTA
CGGGTTCAATTCCCGTCTTCAGCAtgt
Downstream region at tRNA end position 
aaaaaaggcg
Secondary structure (Cloverleaf model)
>W141056107	Leu	TAA
                   c      Atgt aaaaaaggcg
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     T G C C C     A
      T A A        G      | | | | |     A
    A       G G T G       A C G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        T     TGGCAGTAATGCCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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