The detailed information of tRNA gene sequence


Sequence ID>W141056121
Genome IDAOTR01000108
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pedis isoM1224 [AOTR]
Start position on genome 4945
End posion on genome 5029
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tttcactatT
tRNA gene sequence 
GCCGGCGTGGTGAAATGGTATACACGGTAGACTCAAAATCTACTGGGGGCGACTCCGTAA
GGGTTCAAGTCCCTTCGCCGGTAAaa
Downstream region at tRNA end position 
actttgtata
Secondary structure (Cloverleaf model)
>W141056121	Leu	CAA
                   T      AAaa actttgtata
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T A A        G      | | | | |     A
    G       A G T G       A A G G G     C
    G         | | |                 T T
    T       A C A C
      A T          G     TGGGGGCGACTCCGT
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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