The detailed information of tRNA gene sequence


Sequence ID>W141063308
Genome IDAPGJ01000004
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesLimimaricola hongkongensis DSM 17492 [APGJ]
Start position on genome 246108
End posion on genome 246182
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
acgcgccaac
tRNA gene sequence 
GGGTGATTAGCTCAGTGGTAGAGCGCTTCGTTCACATCGAAGATGTCAGGGGTTCAAATC
CCTTATCACCCACCA
Downstream region at tRNA end position 
tgatacggaa
Secondary structure (Cloverleaf model)
>W141063308	Val	CAC
                   c      ACCA tgatacggaa
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     T T C C C     A
        G A        A      | + | | |     A
      T     C T C G       A G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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