The detailed information of tRNA gene sequence


Sequence ID>W141063413
Genome IDAPHQ01000016
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfipia sp. OHSU_II-uncloned [APHQ]
Start position on genome 257240
End posion on genome 257315
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cgcgtgtttc
tRNA gene sequence 
GCCGCCTTAGCTCAGCTGGTAGAGCACCTCATTCGTAATGAGGGGGTCGTAGGTTCGAAT
CCTATAGGCGGCACCA
Downstream region at tRNA end position 
cttctcccgg
Secondary structure (Cloverleaf model)
>W141063413	Thr	CGT
                   c      ACCA cttctcccgg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     T A T C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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