The detailed information of tRNA gene sequence


Sequence ID>W141063811
Genome IDAPJG01000015
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfipia sp. OHSU_I-uncloned [APJG]
Start position on genome 127955
End posion on genome 128031
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
actgccctct
tRNA gene sequence 
CGGGGTATAGCGTAGCCTGGTAGCGCGGCGGTTTTGGGTACCGCAGGTCGGAGGTTCGAA
TCCTCCTGCCCCGACCA
Downstream region at tRNA end position 
aataaccaat
Secondary structure (Cloverleaf model)
>W141063811	Pro	TGG
                   t      ACCA aataaccaat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     C C T C C     A
      C G A        A      | | | | |     G
    C       T G C G       G G A G G     C
    T       + | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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