The detailed information of tRNA gene sequence


Sequence ID>W141063876
Genome IDAPJI01000004
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfipia sp. OHSU_II-C1 [APJI]
Start position on genome 304572
End posion on genome 304645
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cggcctgtga
tRNA gene sequence 
GGCCACGTGGCGGAGTGGTTACGCAACGGTCTGCAAAACCGTGTACACCAGTTCAATTCT
GGTCGTGGCCTCCA
Downstream region at tRNA end position 
atactctctt
Secondary structure (Cloverleaf model)
>W141063876	Cys	GCA
                   a      TCCA atactctctt
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T T
                    T     T G G T C     A
        G A        G      | | | | |     A
      T     G G C G       A C C A G     C
      G       | | |                 T T
      G     A C G C
        T T        A     GTAC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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