The detailed information of tRNA gene sequence


Sequence ID>W141064698
Genome IDAQCF01000036
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema phagedenis 4A [AQCF]
Start position on genome 429544
End posion on genome 429468
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gtttagcaac
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGCTAGAGCGCTTGCATGGCATGCAAGAGGTCAGGGGTTCAAT
TCCCCTCACCTCCATCA
Downstream region at tRNA end position 
aaaacgaaaa
Secondary structure (Cloverleaf model)
>W141064698	Ala	GGC
                   c      ATCA aaaacgaaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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