The detailed information of tRNA gene sequence


Sequence ID>W141064707
Genome IDAQCF01000037
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema phagedenis 4A [AQCF]
Start position on genome 316430
End posion on genome 316344
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attcaagttT
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTTGAAGGCGGCGGTCTTGAAAACCGTTGTGCCGCGAGGTACC
GGGGGTTCGAATCCCCCCTGCTCCGAat
Downstream region at tRNA end position 
tatcgctatt
Secondary structure (Cloverleaf model)
>W141064707	Ser	TGA
                   T      GAat tatcgctatt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTGCCGCGAGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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