The detailed information of tRNA gene sequence


Sequence ID>W141064708
Genome IDAQCF01000037
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema phagedenis 4A [AQCF]
Start position on genome 316313
End posion on genome 316224
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaagtattT
tRNA gene sequence 
GGAGTGGTGACCGAGAGGCCGAAGGTGGCTCCCTGCTAAGGAGTTATACCCCAAAAGGGT
ATCGGGGGTTCGAATCCCCCCTGCTCCGTta
Downstream region at tRNA end position 
tcacacagca
Secondary structure (Cloverleaf model)
>W141064708	Ser	GCT
                   T      GTta tcacacagca
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G + T
                     G - C          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G G G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATACCCCAAAAGGGTATC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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