The detailed information of tRNA gene sequence


Sequence ID>W141064711
Genome IDAQCF01000037
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema phagedenis 4A [AQCF]
Start position on genome 315944
End posion on genome 315856
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cacatctttT
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTCGAAGGTACACGATTGGAAGTCGTGTGTGCCCGAGAGGGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGTtc
Downstream region at tRNA end position 
cggggcctat
Secondary structure (Cloverleaf model)
>W141064711	Ser	GGA
                   T      GTtc cggggcctat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | |                   T T
    T       A G G T
      C G A        A     TGTGCCCGAGAGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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