The detailed information of tRNA gene sequence


Sequence ID>W141064712
Genome IDAQCF01000037
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema phagedenis 4A [AQCF]
Start position on genome 219287
End posion on genome 219214
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcatacgtga
tRNA gene sequence 
GGGGAATTAGCTCAGGTGGTAGAGCGATTGGTTCGCAATCAATAGGTCAGGGGTTCGAGT
CCCCTATTCTCCACag
Downstream region at tRNA end position 
tttctctatc
Secondary structure (Cloverleaf model)
>W141064712	Ala	CGC
                   a      ACag tttctctatc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T G
                    T     T C C C C     A
      G G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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