The detailed information of tRNA gene sequence


Sequence ID>W141066466
Genome IDARPL01000001
Search identical group
Phylum/ClassChloroflexota
SpeciesDehalococcoidia bacterium SCGC AB-539-J10 [ARPL]
Start position on genome 5546
End posion on genome 5622
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agaagattgt
tRNA gene sequence 
AGGGGTGTAGCTCAGTTGGCTAGAGCAGCGGTCTCCAAAACCGCAGGTCGTGGGTTCGAA
TCCTGCCACCCCTGCCA
Downstream region at tRNA end position 
tgccgaggtg
Secondary structure (Cloverleaf model)
>W141066466	Trp	CCA
                   t      GCCA tgccgaggtg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | + + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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