The detailed information of tRNA gene sequence


Sequence ID>W141066999
Genome IDARYM01000063
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHyphomonas polymorpha PS728 [ARYM]
Start position on genome 106
End posion on genome 31
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttccagcctt
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGCAGGTCGGGGGTTCGAGT
CCCTCTGCCCCTGCCA
Downstream region at tRNA end position 
ggcacttttt
Secondary structure (Cloverleaf model)
>W141066999	Trp	CCA
                   t      GCCA ggcacttttt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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