The detailed information of tRNA gene sequence


Sequence ID>W141073084
Genome IDASRX01000003
Search identical group
Phylum/ClassMyxococcota
SpeciesChondromyces apiculatus DSM 436 [ASRX]
Start position on genome 188674
End posion on genome 188769
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aagggcaggc
tRNA gene sequence 
GGAGGTGCGTGGTCGGCTGGTGCCACCCCCGGTCTTCAAAACCGGTGCGAGGCAGCTCTC
GCTGTCTTGGGCAGGTTCGATTCCTGTGTGCCTTCGttg
Downstream region at tRNA end position 
atgggagagg
Secondary structure (Cloverleaf model)
>W141073084	SeC(p)	TCA
                   c      Gttg atgggagagg
                     G - C
                     G + T
                     A - T
                     G - C
                     G - C
                     T + G
                     G + T
                     C - G          T T
                    G     T G T C C     A
      C G G        T      + | | | |     G
    T       C T G G       G C A G G     C
    G         | | |                 T T
    G       C A C C
      T G C        C     TGCGAGGCAGCTCTCGCTGTCTTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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