The detailed information of tRNA gene sequence


Sequence ID>W08004344
Genome IDABHJ01000012
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenivirga sp. 128-5-R1-1 [ABHJ]
Start position on genome 3140
End posion on genome 3214
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cctgtaccaa
tRNA gene sequence 
GGGGACGTAGCTCAGACCGGGAGAGCGCCGCCCTCGCACGGCGGAGGTCGGGGGTTCAAA
TCCCCTCGTCTCCACtt
Downstream region at tRNA end position 
tcttttcttt
Secondary structure (Cloverleaf model)
>W08004344	Ala	CGC
                   a      ACtt tcttttcttt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C C C C     A
      A G A        A      + | | | |     A
    C       C T C G       G G G G G     C
    C       | | | |                 T T
    G       G A G C
      G G A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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