The detailed information of tRNA gene sequence


Sequence ID>W08009444
Genome IDABPG01000001
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexus aurantiacus Y-400-fl [ABPG]
Start position on genome 488986
End posion on genome 489061
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctcttatttt
tRNA gene sequence 
GGGGCGATAGCTCAGTTGGTAGAGCGTCTGCTTTGCACGCAGAAGGTCAGGGGTTCGAAT
CCCCTTCGCTCCACCA
Downstream region at tRNA end position 
caattcatct
Secondary structure (Cloverleaf model)
>W08009444	Ala	TGC
                   t      ACCA caattcatct
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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