The detailed information of tRNA gene sequence


Sequence ID>W141082086
Genome IDATSX01000005
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCommensalibacter papalotli (ex Servin-Garciduenas et al. 2014) MX01 [ATSX]
Start position on genome 32641
End posion on genome 32567
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
agcacgtaat
tRNA gene sequence 
GCTGTTGTAGCTCAGTGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCGAGAGTTCAATCC
TCTCTAACAGCACCA
Downstream region at tRNA end position 
tttcctttac
Secondary structure (Cloverleaf model)
>W141082086	Thr	GGT
                   t      ACCA tttcctttac
                     G - C
                     C - G
                     T - A
                     G - C
                     T - A
                     T - A
                     G + T          C T
                    T     C T C T C     A
        G A        A      | | | | |     A
      T     C T C G       G A G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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