The detailed information of tRNA gene sequence


Sequence ID>W141082509
Genome IDAUNB01000040
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesThioclava indica DT23-4 [AUNB]
Start position on genome 117528
End posion on genome 117604
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggcaatggt
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGTTAGAGCAGGGCGCTCATAACGCCTTGGTTGGGGGTTCGAG
TCCCTCCGGGCCTACCA
Downstream region at tRNA end position 
gcattgacag
Secondary structure (Cloverleaf model)
>W141082509	Met	CAT
                   t      ACCA gcattgacag
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G + T
                    G - C
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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