The detailed information of tRNA gene sequence


Sequence ID>W141082521
Genome IDAUNB01000073
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesThioclava indica DT23-4 [AUNB]
Start position on genome 5861
End posion on genome 5788
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
catcacggat
tRNA gene sequence 
GGCGAGTTGGCGGAGTGGTGACGCAGCGGATTGCAAATCCGTGTACAGGAGTTCGATTCT
CCTACTCGCCTCCA
Downstream region at tRNA end position 
aaattccaca
Secondary structure (Cloverleaf model)
>W141082521	Cys	GCA
                   t      TCCA aaattccaca
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    T     T C C T C     A
        G A        G      | | | | |     G
      T     G G C G       A G G A G     C
      G       | | |                 T T
      G     A C G C
        T G        A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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