The detailed information of tRNA gene sequence


Sequence ID>W141082586
Genome IDAUND01000012
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesThioclava pacifica DSM 10166 [AUND]
Start position on genome 420985
End posion on genome 421061
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cgcccacggt
tRNA gene sequence 
CGGAGCGTAGCGCAGCCTGGTAGCGCACCTGCTTCGGGAGCAGGGGGTCGGAGGTTCGAA
TCCTCTCGCTCCGACCA
Downstream region at tRNA end position 
tttcccgaaa
Secondary structure (Cloverleaf model)
>W141082586	Pro	CGG
                   t      ACCA tttcccgaaa
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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