The detailed information of tRNA gene sequence


Sequence ID>W141086177
Genome IDAUSW01000025
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPsychrobacter aquaticus CMS 56 [AUSW]
Start position on genome 18319
End posion on genome 18230
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatatcgttc
tRNA gene sequence 
GGTGAAGTGGGTGAGTGGCTGAAACCAGTTCCCTGCTAAGGAACCATACGTGTAAGCGTA
TCGAGGGTTCGAATCCCTCCTTCACCGCCA
Downstream region at tRNA end position 
tttattcagt
Secondary structure (Cloverleaf model)
>W141086177	Ser	GCT
                   c      GCCA tttattcagt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CATACGTGTAAGCGTATC
                    G - C
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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