The detailed information of tRNA gene sequence


Sequence ID>W141091801
Genome IDAUZJ01000020
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AUZJ]
Start position on genome 27476
End posion on genome 27403
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
taagccctac
tRNA gene sequence 
GGCGCTTTAGCTCATCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTAGGCGGTTCGAG
TCCGCCATGCGTCAatc
Downstream region at tRNA end position 
ggatgccgca
Secondary structure (Cloverleaf model)
>W141091801	Arg	TCT
                   c      Aatc ggatgccgca
                     G - C
                     G + T
                     C - G
                     G - C
                     C - G
                     T   T
                     T - A          T G
                    T     C C G C C     A
      C T A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTA
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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