The detailed information of tRNA gene sequence


Sequence ID>W141093139
Genome IDAVAO01000003
Search identical group
Phylum/ClassMycoplasmatota
SpeciesCandidatus Phytoplasma tritici dwarf phytoplasma [AVAO]
Start position on genome 90342
End posion on genome 90418
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatattatac
tRNA gene sequence 
CGCGGGGTAGAGCAGTTTGGTAGCTCGTCGGGCTCATAATCCGAAGGTCATAGGTTCGAA
TCCTATCCCCGCAACCA
Downstream region at tRNA end position 
aaaatggtcc
Secondary structure (Cloverleaf model)
>W141093139	Met	CAT
                   c      ACCA aaaatggtcc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A T C C     A
      T G A        A      | | | | |     G
    T       C G A G       A T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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