The detailed information of tRNA gene sequence


Sequence ID>W141093595
Genome IDAVBK01000009
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfipia sp. NBIMC_P1-C1 [AVBK]
Start position on genome 176740
End posion on genome 176665
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ttcgcgtttt
tRNA gene sequence 
GCCGCCTTAGCTCAGCTGGTAGAGCACCTCATTCGTAATGAGGGGGTCGTAGGTTCGAAT
CCTATAGGCGGCACCA
Downstream region at tRNA end position 
ctctttccag
Secondary structure (Cloverleaf model)
>W141093595	Thr	CGT
                   t      ACCA ctctttccag
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     T A T C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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