The detailed information of tRNA gene sequence


Sequence ID>W141093705
Genome IDAVBM01000018
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfipia sp. NBIMC_P1-C3 [AVBM]
Start position on genome 52469
End posion on genome 52394
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgagccggcg
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTTAGAGCCGACCGCTCATAACGGTCTGGTTGCAGGTTCGAGT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position 
cgcagtcctt
Secondary structure (Cloverleaf model)
>W141093705	Met	CAT
                   g      ACCA cgcagtcctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTT
                    G - C
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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