The detailed information of tRNA gene sequence


Sequence ID>W141096746
Genome IDAVFT01000037
Search identical group
Phylum/ClassCyanobacteriota
SpeciesPlanktothrix agardhii NIVA-CYA 34 [AVFT]
Start position on genome 23356
End posion on genome 23265
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttccaactT
tRNA gene sequence 
GGAGAGGTGGCAGAGTTGGTCGAATGCGACACACTCGAAATGTGTTAGGGGCTTTACGGT
TCCTCGTGGGTTCGAATCCCACCCTCTCCGTtt
Downstream region at tRNA end position 
ttctggcccc
Secondary structure (Cloverleaf model)
>W141096746	Ser	CGA
                   T      GTtt ttctggcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G           | | |                 T T
  T         A T G C
    C G A          G     TAGGGGCTTTACGGTTCCTC
                    A - T
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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