The detailed information of tRNA gene sequence


Sequence ID>W141096884
Genome IDAVFX01000019
Search identical group
Phylum/ClassCyanobacteriota
SpeciesPlanktothrix prolifica NIVA-CYA 540 [AVFX]
Start position on genome 1640
End posion on genome 1565
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttaattgtgT
tRNA gene sequence 
CGGGGCGTAGCGCAGCTTGGTAGCGCACTACCTTGGGGTGGTAGGGGTCGCAGGTTCAAA
TCCTGTCGCTCCGATtc
Downstream region at tRNA end position 
taaatcggta
Secondary structure (Cloverleaf model)
>W141096884	Pro	GGG
                   T      ATtc taaatcggta
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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