The detailed information of tRNA gene sequence


Sequence ID>W141096890
Genome IDAVFX01000040
Search identical group
Phylum/ClassCyanobacteriota
SpeciesPlanktothrix prolifica NIVA-CYA 540 [AVFX]
Start position on genome 28444
End posion on genome 28369
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atttaggcaT
tRNA gene sequence 
CGGGATGTAGCGCAGCTTGGTAGCGCACCTCGTTCGGGACGAGGGGGTCGTAGGTTCAAA
TCCTATCATCCCGATtt
Downstream region at tRNA end position 
tgacggttgt
Secondary structure (Cloverleaf model)
>W141096890	Pro	CGG
                   T      ATtt tgacggttgt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T A T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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