The detailed information of tRNA gene sequence


Sequence ID>W141096893
Genome IDAVFX01000056
Search identical group
Phylum/ClassCyanobacteriota
SpeciesPlanktothrix prolifica NIVA-CYA 540 [AVFX]
Start position on genome 5124
End posion on genome 5206
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ccaaccgaaa
tRNA gene sequence 
GGGCGGGTGGCGGAATTGGTAGACGCACCGCACTCAAAATGCGGCGGCTTCGGTCATAAG
AGTTCAAGTCTCTTCCCGCCCACtt
Downstream region at tRNA end position 
ctaagcctta
Secondary structure (Cloverleaf model)
>W141096893	Leu	CAA
                   a      ACtt ctaagcctta
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     T T C T C     A
      T A A        G      | | | | |     A
    T       G G C G       A A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGCTTCGGTCAT
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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