The detailed information of tRNA gene sequence


Sequence ID>W141096896
Genome IDAVFX01000072
Search identical group
Phylum/ClassCyanobacteriota
SpeciesPlanktothrix prolifica NIVA-CYA 540 [AVFX]
Start position on genome 144824
End posion on genome 144749
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
attctggatT
tRNA gene sequence 
GGGTGTGTAACTCAGGTGGATAGAGTAGCGACCTTCTAAGTCGTCTGTCGGGGGTTCGAA
TCCCTCCACACCCGTta
Downstream region at tRNA end position 
aatttcaagg
Secondary structure (Cloverleaf model)
>W141096896	Arg	TCT
                   T      GTta aatttcaagg
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      G G A        A      | + | | |     G
    T       C T C A       G G G G G     C
    G       | | | |                 T T
    G       G A G T
      A T A        A     CTGTC
                    G + T
                    C - G
                    G - C
                    A - T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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