The detailed information of tRNA gene sequence


Sequence ID>W141096909
Genome IDAVFY01000001
Search identical group
Phylum/ClassCyanobacteriota
SpeciesPlanktothrix agardhii NIVA-CYA 56/3 [AVFY]
Start position on genome 60339
End posion on genome 60246
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtcacgctT
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTCGAAAGCGACAGATTGCTAATCTGTTGTACGGCAGGTAACT
CCGTACCGAGGGTTCGAATCCCTCCCTCTCCGTtt
Downstream region at tRNA end position 
ttcaggctga
Secondary structure (Cloverleaf model)
>W141096909	Ser	GCT
                   T      GTtt ttcaggctga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTACGGCAGGTAACTCCGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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