The detailed information of tRNA gene sequence


Sequence ID>W141096917
Genome IDAVFY01000023
Search identical group
Phylum/ClassCyanobacteriota
SpeciesPlanktothrix agardhii NIVA-CYA 56/3 [AVFY]
Start position on genome 127215
End posion on genome 127142
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
actccgctat
tRNA gene sequence 
GCGCTCTTAGTTCAGTTGGTAGAACGCAGGTCTCCAAAACCTGATGTCGGGGGTTCAAGT
CCTCCAGGGCGCGCtg
Downstream region at tRNA end position 
gatacctcca
Secondary structure (Cloverleaf model)
>W141096917	Trp	CCA
                   t      GCtg gatacctcca
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T G
                    T     C C T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G G G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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