The detailed information of tRNA gene sequence


Sequence ID>W141096942
Genome IDAVFY01000108
Search identical group
Phylum/ClassCyanobacteriota
SpeciesPlanktothrix agardhii NIVA-CYA 56/3 [AVFY]
Start position on genome 56168
End posion on genome 56241
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaaaagcaa
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAGGAGTTCAAA
TCCCCTCCCCGCCAttt
Downstream region at tRNA end position 
tataaaatat
Secondary structure (Cloverleaf model)
>W141096942	Met	CAT
                   a      Attt tataaaatat
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | |   |     A
    C       C G A G       A G G A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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