The detailed information of tRNA gene sequence


Sequence ID>W141096977
Genome IDAVFZ01000172
Search identical group
Phylum/ClassCyanobacteriota
SpeciesPlanktothrix prolifica NIVA-CYA 98 [AVFZ]
Start position on genome 12900
End posion on genome 12988
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tattccaccT
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTGAAGGCGCGACACTGGAAATGTCGTTTAGGGGTGACTTTA
ACGAGGGTTCGAATCCCTCCCTCTCCGTtt
Downstream region at tRNA end position 
ttgttagaag
Secondary structure (Cloverleaf model)
>W141096977	Ser	GGA
                   T      GTtt ttgttagaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TTTAGGGGTGACTTTAAC
                    C - G
                    G - C
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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