The detailed information of tRNA gene sequence


Sequence ID>W141098066
Genome IDAVHP01000916
Search identical group
Phylum/ClassBacillota
SpeciesClostridioides difficile CD129 [AVHP]
Start position on genome 5346
End posion on genome 5436
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atagaaatat
tRNA gene sequence 
GGAGAGGTACTCAAGTGGTAAAGAGGATAGTTTGCTAAACTATTAGGTCAATTAATTTGA
TACGAGGGTTCAAATCCCTTCCTCTCTTCCA
Downstream region at tRNA end position 
ataaaaaaag
Secondary structure (Cloverleaf model)
>W141098066	Ser	GCT
                   t      TCCA ataaaaaaag
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        A      + | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    T       A G A G
      A A          G     TAGGTCAATTAATTTGATAC
                    A - T
                    T - A
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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